Description: CAVER - software tool for protein analysis and visualization
analysis (2827) channel (854) protein (756) tunnel (376) dynamics (293) substrate (57) molecule (51) amino acid (41) trajectory (18)
CAVER provides rapid, accurate and fully automated calculation of pathways leading from buried cavities to outside solvent in protein structures. Study of these pathways is important in drug design and molecular enzymology.
CAVER facilitates analysis of any molecular structure including proteins, nucleic acids, inorganic materials, and is available as online version or PyMOL plugin.
CAVER Analyst enables efficient visualization of calculated pathways and can be run online using Java Web Start technology.