Description: PHYLOViZ is an open source software that allows the analysis of sequence-based typing methods that generate allelic profiles and their associated epidemiological data.
software (33692) visualization (978) mst (111) phylogenetic (5) phyloviz (1) allelic profiles (1) epidemiological data (1) goeburst (1) minimum spanning tree (1) eburst (1)
PHYLOViZ is available as a desktop JAVA application and also as an online application . It allows the analysis of sequence-based typing methods that generate allelic profiles and their associated epidemiological data.
All PHYLOViZ code is available in public repositories and under GPL license . Click in development above to explore it.
For representing the possible evolutionary relationships between strains, PHYLOViZ uses the goeBURST algorithm , a refinement of eBURST algorithm by Feil et al. , and its expansion to generate a complete minimum spanning tree (MST).